Table 1 Results output from the dbCAN3 server for the analysis of the Sva0996 marine group bin134 genome sequence. Only results confirmed by > = 2 tools are presented. GH = glycoside hydrolase; GT = glycosyl transferase; CE = carbohydrate esterase; AA = Auxiliary activity
From: Actinobacteria diversity associated with marine sediments and a wetland system, Agulhas-South Africa
Gene ID | EC# | HMMER | dbCAN_sub | DIAMOND | # of Tools |
|---|---|---|---|---|---|
MPNQ01000001.1_211 | 3.2.1.21|3.2.1.126|3.2.1.37 | GH3(32–240) | GH3_e175 | GH3 | 3 |
MPNQ01000001.1_54 | - | GH2(9-592) | GH2_e67 | GH2 | 3 |
MPNQ01000001.1_95 | - | GH15(489–848) | GH15_e19 | GH15 | 3 |
MPNQ01000001.1_96 | 2.4.1.15 | GT20(43–500) | GT20_e1 | GT20 | 3 |
MPNQ01000002.1_14 | - | GH3(89–315) | GH3_e96 | GH3 | 3 |
MPNQ01000003.1_113 | - | GH3(91–317) | GH3_e96 | GH3 | 3 |
MPNQ01000004.1_122 | - | GT4(234–384) | GT4_e2125 | GT4 | 3 |
MPNQ01000004.1_15 | - | GH3(63–270) | GH3_e99 | GH3 | 3 |
MPNQ01000005.1_25 | 3.2.1.20|3.2.1.10 | GH13_23(31–375) | GH13_e182 | GH13 | 3 |
MPNQ01000009.1_27 | - | GT4(215–369) | GT4_e3552 | GT4 | 3 |
MPNQ01000018.1_42 | 3.2.1.21|3.2.1.126|3.2.1.37 | GH3(33–245) | GH3_e175 | GH3 | 3 |
MPNQ01000023.1_13 | - | GH20(1-229) | GH20_e36 | GH20 | 3 |
MPNQ01000025.1_3 | - | GT4(179–324) | GT4_e2372 | GT4 | 3 |
MPNQ01000027.1_4 | 3.2.1.- | GH2(3-579) | GH2_e66 | GH2 | 3 |
MPNQ01000029.1_6 | - | GT51(76–247) | GT51_e163 | GT51 | 3 |
MPNQ01000038.1_27 | - | GT4(188–346) | GT4_e3061 | GT4 | 3 |
MPNQ01000041.1_21 | - | AA3_2(2-526) | AA3_e57 | AA3_2 | 3 |
MPNQ01000001.1_206 | 3.2.1.8 | GH10(6-318) | GH10_e103 | N | 2 |
MPNQ01000001.1_56 | - | GH1(11–400) | GH1_e108 | N | 2 |
MPNQ01000002.1_206 | - | GT28(211–374) | GT28_e100 | N | 2 |
MPNQ01000003.1_115 | - | GH26(121–242) | GH26_e26 | N | 2 |
MPNQ01000005.1_106 | - | CE14(4-132) | CE14_e6 | N | 2 |
MPNQ01000006.1_88 | 3.5.1.115 | CE14(8-142) | CE14_e1 | N | 2 |
MPNQ01000007.1_52 | 2.4.1.266 | GT81(6-290) | GT81_e0 | N | 2 |
MPNQ01000021.1_16 | - | AA3_2(3-504) | AA3_e4 | N | 2 |
MPNQ01000023.1_30 | - | AA3(5-505) | AA3_e57 | N | 2 |
MPNQ01000030.1_9 | - | CE4 (2-114) | CE4_e209 | N | 2 |
MPNQ01000035.1_12 | - | GT4(201–349) | GT4_e2284 | N | 2 |
MPNQ01000035.1_13 | - | GT4(189–344) | GT4_e1595 | N | 2 |
MPNQ01000035.1_23 | - | GT4(158–309) | GT4_e2034 | N | 2 |
MPNQ01000040.1_22 | - | GT2(2-157) | GT2 | N | 2 |
MPNQ01000047.1_19 | - | CE9(5-357) | CE9_e30 | N | 2 |
MPNQ01000050.1_16 | - | CE14(13–129) | CE14_e46 | N | 2 |
MPNQ01000035.1_11 | - | N | GT4_e939 | GT4 | 2 |
MPNQ01000035.1_27 | - | N | GT2 + GT4_e1547 | GT2 + GT4 | 2 |
MPNQ01000035.1_3 | - | N | GT2 | GT2 | 2 |
MPNQ01000001.1_169 | - | N | GT94_e7 | GT0 | 2 |
MPNQ01000002.1_51 | - | N | AA2_e1 | AA0 | 2 |